TSV

NCBI Taxonomy - TSV

NCBI Taxonomy (National Center for Biotechnology Information Taxonomy) is a database that systematically organizes the classification and nomenclature of all organisms registered in public sequence databases, maintained by the National Center for Biotechnology Information in the United States. It currently covers approximately 10% of described species on Earth and plays a crucial role in linking genetic sequence data with biological classification. The database hierarchically organizes major organism groups including Archaea, Bacteria, Eukaryota, and Viruses, and is widely used worldwide as a foundation for biomedical research and bioinformatics analysis.

biological classification database bioinformatics gene sequences phylogenetics NCBI
code	slug	name	description	lineage	rank	taxonomyId
2157	archaea	Archaea	A domain of prokaryotic organisms distinct from bacteria, comprising single-celled organisms adapted to extreme environments.	cellular organisms	domain	2157
2	bacteria	Bacteria	The most diverse and ubiquitously distributed domain of prokaryotic organisms.	cellular organisms	domain	2
2759	eukaryota	Eukaryota	A domain of organisms whose cells contain a membrane-bound nucleus.	cellular organisms	domain	2759
10239	viruses	Viruses	Non-cellular infectious agents that depend on host cells for replication.	root	superkingdom	10239
28384	other-sequences	Other sequences	A category containing non-organismal sequence data such as artificial sequences, plasmids, and transposons.	other entries	no rank	28384
12908	unclassified-sequences	Unclassified sequences	A category containing sequences that cannot be assigned to specific taxonomic groups or derived from environmental samples.	unclassified entries	no rank	12908